Tableau information
Concept source: d1ntoa2 amino acid (a.a.) range (LYS172)(ASN248)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS172) (GLY178) E1
(GLY181) (ALA193) H2
(THR198) (ASP203) E3
(ARG205) (ALA215) H4
(ASP218) (ASN222) E5
(PRO228) (ILE235) H6
(ASP242) (ASN248) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -162.8° H2
E3 -15.1° -174.7° E3
H4 141.3° -24.1° 156.2° H4
E5 -37.9° 158.3° -22.8° 174.1° E5
H6 156.3° -7.5° 167.4° -23.4° 160.6° H6
E7 -16.8° 149.7° -30.3° 126.0° -52.0° 145.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iiub_ : (ARG3) (SER86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
d3f1la_ : (ARG13) (ASP105) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3zv6a_ : (GLY5) (PRO85) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Comamonas testosteroni [TaxId: 285]
d3ubta_ : (MET1) (GLY67) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus aegyptius [TaxId: 197575]
d1jdbb3 : (LYS7) (THR88) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d3zv3b_ : (GLU6) (PRO85) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pandoraea pnomenusa [TaxId: 93220]
d2yv1a1 : (LYS15) (ILE76) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain |Methanocaldococcus jannaschii [TaxId: 243232]
d1orra_ : (ALA2) (LEU80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |CDP-tyvelose-2-epimerase |Salmonella typhi [TaxId: 90370]
d2pzka_ : (ARG2) (ASP81) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
d1a9xa3 : (LYS8) (THR89) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d2gdza1 : (LYS6) (ASN90) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |15-hydroxyprostaglandin dehydrogenase, PGDH |Human (Homo sapiens) [TaxId: 9606]
d1gsoa2 : (MET1) (PRO72) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Glycinamide ribonucleotide synthetase (GAR-syn), N-domain |Escherichia coli [TaxId: 562]
d1kvta_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d1udca_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d1kvqa_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d4ixwb_ : (SER2) (PRO83) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Rhizobium radiobacter [TaxId: 358]
d4iiua_ : (ARG3) (SER86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
d2yv2a1 : (ARG15) (VAL77) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain |Aeropyrum pernix [TaxId: 272557]
d3gy0a_ : (ARG11) (ASP103) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Shigella flexneri [TaxId: 623]
d1keua_ : (MET1) (LEU80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]
d1xg5c_ : (ARG12) (PRO103) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Putative dehydrogenase ARPG836 (MGC4172) |Human (Homo sapiens) [TaxId: 9606]
d1sqga2 : (GLU248) (ASP322) [view usage] : c.66.1.38 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |NOL1/NOP2/sun |Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain |Escherichia coli [TaxId: 562]
d2fcab_ : (PRO40) (PHE116) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Bacillus subtilis [TaxId: 1423]
d1jdbe3 : (LYS7) (THR88) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d2pbza1 : (ILE4) (GLY68) [view usage] : c.30.1.8 |PreATP-grasp domain |PreATP-grasp domain |PurP N-terminal domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Thermococcus kodakaraensis [TaxId: 311400]
d1bxra3 : (LYS8) (THR89) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d1a9xa4 : (GLU560) (GLN641) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d1kvua_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d3o26a_ : (ARG13) (ASN97) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Papaver somniferum [TaxId: 3469]
d1kvra_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d3gz4a_ : (ARG11) (ASP103) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d2zata_ : (LYS15) (PHE104) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pig (Sus scrofa) [TaxId: 9823]
d1a9ya_ : (ARG2) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
d3ufxa1 : (ARG9) (PHE71) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus aquaticus [TaxId: 271]
d2yz7a_ : (LYS6) (ASN89) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Alcaligenes faecalis [TaxId: 511]
d1jdbb4 : (GLU559) (GLN640) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains |Escherichia coli [TaxId: 562]
d2nxea1 : (LYS123) (ASN191) [view usage] : c.66.1.39 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Ribosomal protein L11 methyltransferase PrmA |PrmA-like protein TTHA0656 (TT0836) |Thermus thermophilus [TaxId: 274]
d2c29d_ : (GLU6) (VAL84) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Grape (Vitis vinifera) [TaxId: 29760]
d1a9za_ : (MET1) (PHE80) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.66, c.30