Tableau information
Concept source: d1h43a_ amino acid (a.a.) range (VAL6)(GLY83)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL6) (VAL11) E1
(GLN13) (ARG30) H2
(PRO32) (ASP40) E3
(SER41) (ASN52) H4
(ASP55) (ASP60) E5
(ASP60) (LEU69) H6
(LYS73) (GLY83) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 158.2° H2
E3 -25.5° -170.5° E3
H4 154.5° -46.0° 129.1° H4
E5 -45.2° 124.9° -64.0° -148.3° E5
H6 116.0° -84.7° 90.6° -38.8° -134.2° H6
E7 -80.4° 79.3° -105.9° 125.0° -55.3° -163.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1biya1 : (ASN5) (GLY83) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d1aiva1 : (SER5) (GLU83) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d4lfka_ : (MET1) (VAL84) [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 568704]
d1dtza2 : (ALA343) (LEU411) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Camel (Camelus dromedarius) [TaxId: 9838]
d1nfta_ : (SER5) (TYR82) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1btja_ : (LYS4) (GLY86) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1vlha_ : (ASP28) (LEU116) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Thermotoga maritima [TaxId: 2336]
d1bkaa1 : (VAL6) (GLY83) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1bp5c_ : (LYS4) (GLY86) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d3qyta1 : (LYS4) (GLY86) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rmta_ : (ALA107) (LEU186) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Escherichia coli [TaxId: 562]
d4oqoa_ : (VAL345) (LEU411) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Cow (Bos taurus) [TaxId: 9913]
d1d4na_ : (LYS4) (GLY86) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d4n15a_ : (LYS167) (GLU228) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia ambifaria [TaxId: 339670]
d1h3da1 : (LYS125) (VAL185) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Escherichia coli [TaxId: 562]
d4qhqa_ : (VAL31) (GLY106) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2hava1 : (VAL342) (ASN413) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1jqka_ : (GLY292) (ASP358) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Rhodospirillum rubrum [TaxId: 1085]
d1zczb1 : (GLY25) (ASP116) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Thermotoga maritima [TaxId: 2336]
d1cb6a1 : (VAL1006) (GLY1083) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1vlhb_ : (ASP28) (LEU116) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.108, c.26, c.121, c.24, e.26