Protein Concepts Dictionary

Tableau information

Concept source:  d2qzsa_  amino acid (a.a.) range (GLY322)(ARG396)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY322)  (GLY328) E1
	  (ASP331)  (GLU344) H2
	  (GLN348)  (GLY354) E3
	  (HIS356)  (GLY366) H4
	  (ASP368)  (SER374) E5
	  (LEU381)  (TYR389) H6
	  (THR391)  (ARG396) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -144.5°   H2                                        
E3       -5.7° -146.7°   E3                                 
H4     -157.9°   52.8° -152.4°   H4                          
E5      -56.7°  148.8°  -57.5° -116.7°   E5                   
H6      132.8°  -34.9°  130.1°  -48.2° -162.7°   H6            
E7      -80.4°  126.2°  -81.6°   96.6°  -24.1° -144.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jzta_ :    (ASN87)  (ASP173)   [view usage] : c.104.1.1 |YjeF N-terminal domain-like |YjeF N-terminal domain-like |YjeF N-terminal domain-like |Hypothetical protein YNL200c (YNU0_YEAST) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2iv7a1 :   (THR229)  (THR300)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
 d1rzub_ :   (GLY321)  (VAL394)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
 d4fkza_ :   (ASP232)  (ARG302)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |automated matches |Bacillus subtilis [TaxId: 224308]
 d4bqfb_ :   (ARG608)  (GLY697)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1rzva_ :   (GLY321)  (VAL394)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
 d2bisb_ :   (MET284)  (SER358)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d1v4vb_ :   (HIS230)  (ARG300)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Thermus thermophilus [TaxId: 274]
 d2wtxa_ :   (LYS289)  (GLN386)   [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2wtxd_ :   (LYS289)  (SER385)   [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1rzua_ :   (GLY321)  (ALA395)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
 d3froa_ :   (ARG285)  (SER358)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d4fkzb_ :   (ASP232)  (ARG302)   [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |automated matches |Bacillus subtilis [TaxId: 224308]
 d2qzsa_ :   (GLY322)  (ARG396)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3d1ja_ :   (GLY321)  (ARG396)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3copa_ :   (GLY321)  (ARG396)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d2iw1a_ :   (THR229)  (THR300)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
 d2bfwa1 :   (MET284)  (SER358)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]
 d3beoa_ :   (ASP234)  (ARG304)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2bisa1 :   (MET284)  (SER358)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.104,    c.87