Tableau information
Concept source: d1jx6a_ amino acid (a.a.) range (ASP259)(LYS345)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP259) (CYS264) E1
(THR266) (GLY280) H2
(ILE284) (GLY290) E3
(SER293) (GLY302) H4
(ASP305) (MET311) E5
(ASP313) (ASP329) H6
(THR334) (LYS345) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 155.2° H2
E3 -17.3° -159.2° E3
H4 -166.6° 29.9° -149.9° H4
E5 -24.6° -163.0° -9.0° -144.1° E5
H6 -22.6° -174.5° -22.9° 154.5° 21.1° H6
E7 153.2° -19.2° 145.6° -21.7° 145.4° 166.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ga5a_ : (GLU205) (LYS300) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Salmonella typhimurium, strain lt2 [TaxId: 90371]
d3l6ua_ : (ASP197) (ASP282) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
d1gcaa_ : (GLU205) (LYS300) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Salmonella typhimurium, strain lt2 [TaxId: 90371]
d4wt7b_ : (ALA238) (ASN324) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d2hpha_ : (VAL206) (LYS300) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d2hj9a_ : (ASP259) (LYS345) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Quorum-sensing signal (autoinducer-2) binding protein LuxP |Vibrio harveyi [TaxId: 669]
d3gbva_ : (LYS259) (PRO339) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d2iksa_ : (GLN240) (ARG327) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1jx6a_ : (ASP259) (LYS345) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Quorum-sensing signal (autoinducer-2) binding protein LuxP |Vibrio harveyi [TaxId: 669]
d4wt7a_ : (LYS237) (LYS325) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d3l49a_ : (ALA220) (LYS307) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d4irxa_ : (ASP225) (SER313) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Caulobacter crescentus [TaxId: 190650]
d1guba_ : (LYS195) (GLN288) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-allose-binding protein |Escherichia coli [TaxId: 562]
d2ipma_ : (VAL206) (LYS300) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.93