Protein Concepts Dictionary

Tableau information

Concept source:  d2w37a2  amino acid (a.a.) range (LEU161)(VAL237)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU161)  (GLY167) E1
	  (ASN172)  (LEU184) H2
	  (ASN187)  (ALA192) E3
	  (THR199)  (GLY214) H4
	  (GLY214)  (THR220) E5
	  (ASP222)  (LYS228) H6
	  (ASN231)  (VAL237) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -166.3°   H2                                        
E3       -9.8° -161.9°   E3                                 
H4     -171.9°   19.0° -163.2°   H4                          
E5      -23.4°  152.7°  -13.7° -149.4°   E5                   
H6     -150.6°   40.5° -157.7°   32.2° -159.6°   H6            
E7      -24.7°  155.2°  -34.5°  160.3°  -47.8°  128.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hv4a1 :    (ARG20)   (SER85)   [view usage] : c.5.1.0 |MurCD N-terminal domain |MurCD N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
 d1ezza2 :   (HIS156)  (ARG229)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d1pg5a2 :   (LEU150)  (ARG221)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Sulfolobus acidocaldarius [TaxId: 2285]
 d1snya_ :     (ASN3)   (PRO95)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase sniffer |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d3m4na2 :   (LYS171)  (SER253)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d1fb5a2 :   (LEU189)  (THR264)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Sheep (Ovis aries) [TaxId: 9940]
 d3tpfa2 :   (LYS147)  (THR221)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d1p3db1 :    (GLN19)   (SER85)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d3hbfa_ :   (SER274)  (HIS352)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
 d1p3da1 :    (GLN19)   (SER85)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d1p31a1 :    (GLN19)   (SER85)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d1tugc1 :   (HIS156)  (ARG229)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d3m5da2 :   (LYS171)  (SER253)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d1gqya1 :    (GLN19)   (SER84)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d4oh7a2 :   (LYS156)  (THR227)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Brucella melitensis [TaxId: 546272]
 d1kerb_ :     (LYS5)   (TYR82)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]
 d1c9ya2 :   (LEU189)  (THR264)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Human (Homo sapiens) [TaxId: 9606]
 d6gpba_ :   (LEU562)  (SER667)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4nf2a2 :   (ILE156)  (VAL231)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d8gpba_ :   (LEU562)  (SER667)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4h31a2 :   (ILE158)  (VAL234)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d1duvg2 :   (MET156)  (VAL232)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Escherichia coli [TaxId: 562]
 d3tpfb2 :   (LYS147)  (THR221)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d3upda2 :   (ILE158)  (VAL234)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d3dwga_ :    (ALA72)  (TYR150)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3m5ca2 :   (LYS171)  (SER253)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d1dxha2 :   (ILE156)  (VAL232)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Pseudomonas aeruginosa [TaxId: 287]
 d2i6ua2 :   (LEU149)  (THR225)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2w37a2 :   (LEU161)  (VAL237)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Lactobacillus hilgardii [TaxId: 1588]
 d4e2fa2 :   (LEU155)  (THR228)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d2ecpa_ :   (ILE562)  (SER667)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
 d1gqqa1 :    (GLN19)   (SER84)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d1p31b1 :    (GLN19)   (SER85)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d1gqqb1 :    (GLN19)   (SER84)   [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
 d4a8ta2 :   (CYS154)  (VAL228)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.79,    c.87,    c.78,     c.5