Tableau information
Concept source: d4gvoa_ amino acid (a.a.) range (GLN35)(ASP117)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN35) (THR41) E1
(TYR60) (LEU72) H2
(LYS76) (THR81) E3
(ASP83) (GLY94) H4
(ASP97) (HIS101) E5
(SER106) (LYS111) H6
(PHE113) (ASP117) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 171.2° H2
E3 -25.3° 162.2° E3
H4 -148.9° 31.7° 133.5° H4
E5 -29.9° 143.8° -54.0° -158.0° E5
H6 145.2° -42.3° 120.1° -31.2° 170.7° H6
E7 -102.2° 70.7° -127.1° 94.9° -73.1° -112.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3vv5a_ : (GLY12) (ASN93) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d1xs5a_ : (GLU7) (GLY82) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative lipoprotein (NlpA family) |Treponema pallidum [TaxId: 160]
d4h5fa_ : (GLY40) (ILE124) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d4gvoa_ : (GLN35) (ASP117) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d2v25a_ : (GLY12) (GLU97) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
d3h7ma_ : (ARG56) (PRO136) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d4f3pb1 : (LYS26) (GLN118) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3vv5b_ : (GLY12) (ASN93) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d1r9la_ : (THR134) (VAL208) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glycine betaine-binding periplasmic protein ProX |Escherichia coli [TaxId: 562]
d3vvda_ : (GLY12) (ASN93) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d4kr5b_ : (ASP260) (SER341) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactococcus lactis [TaxId: 272623]
d2qmwa1 : (MSE1) (GLY77) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Prephenate dehydratase |Staphylococcus aureus [TaxId: 1280]
d2y7ib_ : (ALA22) (GLN104) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d3qaxb_ : (ASP7) (PRO91) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chlamydophila pneumoniae [TaxId: 83558]
d4oena_ : (TYR269) (GLU348) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d1o7ta_ : (ASP1) (ALA76) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Neisseria gonorrhoeae [TaxId: 485]
d2q2aa_ : (ALA18) (ASP101) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d4h5fd_ : (GLY40) (ILE124) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d1ii5a_ : (LYS7) (PRO101) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Synechocystis sp., GluR0 [TaxId: 1143]
d2o1ma_ : (GLN16) (VAL99) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3kzga_ : (ASN39) (LEU101) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d2z22a_ : (LEU4) (PRO73) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Yersinia pestis [TaxId: 214092]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94