Protein Concepts Dictionary

Tableau information

Concept source:  d3txya_  amino acid (a.a.) range (ASP97)(ILE172)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP97)  (HIS103) E1
	  (ASP112)  (GLY121) H2
	  (THR123)  (GLY129) E3
	  (ALA131)  (ASN147) H4
	  (ASN149)  (ASP155) E5
	  (ALA156)  (TRP160) E6
	  (SER161)  (ILE172) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -150.0°   H2                                        
E3      -68.0°  138.1°   E3                                 
H4      105.3°  -48.5°  173.2°   H4                          
E5      -90.1°  114.0°  -24.1° -162.0°   E5                   
E6      -19.0° -160.9°   49.7° -123.6°  -71.2°   E6            
H7      108.4°  -42.9° -169.3°   11.0° -152.7°  125.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3s2sa_ :    (VAL98)  (GLY178)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d3r2ja_ :   (GLN122)  (TRP191)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
 d3hb7f_ :    (GLU91)  (THR170)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Alkaliphilus metalliredigens [TaxId: 293826]
 d1nbab_ :   (GLY138)  (ASN216)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |N-carbamoylsarcosine amidohydrolase |Arthrobacter sp. [TaxId: 1667]
 d3s2sd_ :    (VAL98)  (GLY178)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d3mcwb_ :    (GLU87)  (LEU173)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 243365]
 d1j2rc_ :   (ILE108)  (TYR183)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
 d3txya_ :    (ASP97)  (ILE172)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3hb7a_ :    (GLU91)  (THR170)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Alkaliphilus metalliredigens [TaxId: 293826]
 d3r2jb_ :   (GLN122)  (GLY202)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
 d1j2ra_ :   (ILE108)  (ILE182)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
 d1j2rb_ :   (ILE108)  (TYR183)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Hypothetical protein YecD |Escherichia coli [TaxId: 562]
 d4l08a_ :   (ASP111)  (GLN188)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas putida [TaxId: 1042876]
 d4l07a_ :   (ASP111)  (GLN188)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas putida [TaxId: 1042876]
 d1nbaa_ :   (GLY138)  (ASN216)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |N-carbamoylsarcosine amidohydrolase |Arthrobacter sp. [TaxId: 1667]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.33