Protein Concepts Dictionary

Tableau information

Concept source:  d1oe7a2  amino acid (a.a.) range (ASP4)(HIS82)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP4)   (TYR10) E1
	   (ALA17)   (GLY28) H2
	   (GLU32)   (SER37) E3
	   (TRP41)   (THR47) H4
	   (PRO54)   (ASP60) E5
	   (HIS64)   (GLU70) E6
	   (SER71)   (HIS82) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -146.7°   H2                                        
E3      -23.7° -161.5°   E3                                 
H4     -136.0°   66.3° -132.0°   H4                          
E5      163.1°   42.5°  141.1°   55.1°   E5                   
E6      -38.2°  120.6°  -59.7° -109.6°  158.7°   E6            
H7     -146.3°   13.6° -169.0°   56.6°   47.5°  112.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tw9a2 :     (VAL2)   (PHE75)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class sigma GST |Heligmosomoides polygyrus [TaxId: 6339]
 d3ir4a1 :     (ALA0)   (LEU72)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
 d1a0fa2 :     (MET1)   (PRO78)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class beta GST |Escherichia coli [TaxId: 562]
 d4kgic1 :     (SER0)   (PRO78)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Shigella flexneri [TaxId: 198215]
 d4kx4a1 :    (SER-2)   (LEU72)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d4ofma1 :     (VAL2)   (PHE75)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Necator americanus [TaxId: 51031]
 d2f8fa2 :     (ASP4)   (HIS82)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
 d2caib2 :     (HIS5)   (HIS83)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
 d2f8fb2 :     (GLY3)   (HIS82)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
 d2on5a1 :     (VAL2)   (PHE75)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Necator americanus [TaxId: 51031]
 d1gsqa2 :     (LYS2)   (PHE74)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class sigma GST |Squid (Ommastrephes sloani pacificus) [TaxId: 6634]
 d4kdyb1 :     (SER0)   (PRO83)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anaeromyxobacter dehalogenans [TaxId: 455488]
 d2on7a1 :     (HIS3)   (PHE75)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Necator americanus [TaxId: 51031]
 d4kgia1 :     (MET1)   (PRO78)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Shigella flexneri [TaxId: 198215]
 d1oe7a2 :     (ASP4)   (HIS82)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class alpha GST |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
 d1m0ua2 :    (HIS48)  (VAL121)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class sigma GST |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d4ksma1 :    (ALA-1)   (LEU72)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d1u3ia1 :     (HIS5)   (HIS82)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d1oe7b2 :     (HIS5)   (HIS82)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class alpha GST |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
 d1oe8b2 :     (GLY3)   (HIS82)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class alpha GST |Blood fluke (Schistosoma haematobium) [TaxId: 6185]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47