Protein Concepts Dictionary

Tableau information

Concept source:  d2f02a_  amino acid (a.a.) range (GLN30)(LEU103)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN30)   (THR34) E1
	   (LYS38)   (GLY50) H2
	   (ASP52)   (GLY61) E3
	   (GLY61)   (ASN75) H4
	   (PRO77)   (LYS84) E5
	   (LYS84)   (HIS95) E6
	   (GLY97)  (LEU103) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2       85.5°   H2                                        
E3     -105.3° -150.1°   E3                                 
H4      -87.1°  -11.4° -159.1°   H4                          
E5       93.4° -161.5°  -15.4° -172.8°   E5                   
E6      142.6°  -79.4°  104.8°   71.8°  111.3°   E6            
E7      -47.8°  119.2°   59.0° -126.6°   50.7°  161.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jg1a_ :    (GLN29)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2jgvb_ :    (GLU30)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2awdb_ :    (GLN30)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2f02a_ :    (GLN30)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d2q5ra_ :    (GLN29)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2jgvc_ :    (GLN29)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2f02b_ :    (GLN30)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d2jg1c_ :    (GLN29)  (LEU103)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2awda1 :    (GLN30)  (LEU103)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Tagatose-6-phosphate kinase LacC |Enterococcus faecalis [TaxId: 1351]
 d3cqdb_ :    (VAL34)  (VAL107)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72