Protein Concepts Dictionary

Tableau information

Concept source:  d1cz3a_  amino acid (a.a.) range (LEU75)(GLU164)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU75)   (ASN79) E1
	   (SER81)   (GLY93) H2
	   (GLU95)  (GLY101) E3
	  (GLY102)  (LYS113) H4
	  (ASP116)  (PRO124) E5
	  (GLU147)  (ASN152) E6
	  (ARG154)  (GLU164) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      137.1°   H2                                        
E3      -81.6°  140.3°   E3                                 
H4       56.6°  -86.8° -131.5°   H4                          
E5     -117.0°  105.5°  -39.5° -141.5°   E5                   
E6     -128.3°   92.9°  -47.4° -165.5°  -25.6°   E6            
E7       47.1°  -90.0°  128.2°   28.8°  162.4°  165.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2hxva1 :   (HIS253)  (GLU341)   [view usage] : c.71.1.2 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |RibD C-terminal domain-like |Riboflavin biosynthesis protein RibD |Thermotoga maritima [TaxId: 2336]
 d4gh8a_ :    (VAL76)  (ARG162)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d2azna1 :   (GLY123)  (LYS221)   [view usage] : c.71.1.2 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |RibD C-terminal domain-like |HTP reductase |Methanococcus jannaschii [TaxId: 2190]
 d2b3za1 :   (VAL260)  (PRO358)   [view usage] : c.71.1.2 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |RibD C-terminal domain-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
 d3nrrb1 :    (CYS98)  (ARG186)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Babesia bovis [TaxId: 5865]
 d3k2ha1 :    (CYS98)  (ARG186)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Babesia bovis [TaxId: 484906]
 d3jw3a_ :    (GLY73)  (GLN162)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d4g3ma2 :   (ASN261)  (PRO358)   [view usage] : c.71.1.2 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |RibD C-terminal domain-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
 d1cz3a_ :    (LEU75)  (GLU164)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.71