Tableau information
Concept source: d3aiaa_ amino acid (a.a.) range (GLY111)(LYS200)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY111) (ARG115) E1
(PHE119) (GLY130) H2
(ASN132) (HIS137) E3
(ASN150) (GLY156) E4
(GLU163) (LYS173) H5
(LYS175) (SER180) E6
(HIS185) (LYS200) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 120.9° H2
E3 -82.9° 139.5° E3
E4 -62.8° -165.8° -27.2° E4
H5 107.2° -14.6° -139.4° -158.1° H5
E6 -121.4° 111.4° -38.9° -60.2° -120.7° E6
H7 127.9° 8.1° 132.5° 159.6° 20.7° 103.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3aiaa_ : (GLY111) (LYS200) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1nxza2 : (ASN145) (GLY241) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |Hypothetical protein HI0303 |Haemophilus influenzae [TaxId: 727]
d4pzka_ : (LYS57) (ASN152) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d3ai9x_ : (GLY111) (CYS203) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1nxzb2 : (ASN145) (GLY241) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |Hypothetical protein HI0303 |Haemophilus influenzae [TaxId: 727]
d2qmmb_ : (GLY197) (GLN287) [view usage] : c.116.1.7 |alpha/beta knot |alpha/beta knot |AF1056-like |Uncharacterized protein AF1056 |Archaeoglobus fulgidus [TaxId: 2234]
d1v2xa_ : (VAL74) (GLY172) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |tRNA (Gm18) methyltransferase TrmH |Thermus thermophilus [TaxId: 274]
d1ipaa1 : (LEU169) (LEU263) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |RrmA (RrmH), C-terminal domain |Thermus thermophilus [TaxId: 274]
d3e5ya_ : (GLN56) (GLY151) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 425067]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.116