Tableau information
Concept source: d1x4ba1 amino acid (a.a.) range (ARG28)(ARG102)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG28) (GLY34) E1
(THR40) (GLY52) H2
(ASP56) (ASP62) E3
(GLY72) (SER77) E4
(MET79) (ALA88) H5
(PRO90) (ASP94) E6
(ARG96) (ARG102) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 129.1° H2
E3 -33.5° 142.7° E3
E4 149.6° -36.9° 176.7° E4
H5 29.1° 103.5° -45.6° 136.1° H5
E6 -65.1° 142.5° -70.8° 110.9° -93.9° E6
E7 150.2° -64.1° 118.0° -58.8° -133.6° 123.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1sjra_ : (PRO45) (PHE120) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Polypyrimidine tract-binding protein |Human (Homo sapiens) [TaxId: 9606]
d4ed5b2 : (ALA106) (LYS182) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hd0a_ : (LYS98) (ARG171) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Heterogeneous nuclear ribonucleoprotein d0 |Human (Homo sapiens) [TaxId: 9606]
d2rrba_ : (CYS118) (PHE193) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3s7ra_ : (GLY69) (LYS143) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2krra1 : (PHE8) (LYS81) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolin |Human (Homo sapiens) [TaxId: 9606]
d4iufa_ : (SER104) (LEU177) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zzza_ : (ARG185) (PHE257) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dnga_ : (TYR41) (ILE114) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1sjqa_ : (VAL18) (PHE88) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Polypyrimidine tract-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1iqta_ : (LYS183) (VAL256) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein D0 (AUF1) |Human (Homo sapiens) [TaxId: 9606]
d2lyva2 : (LYS105) (SER182) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ytya2 : (VAL113) (PHE184) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Lupus LA protein |Human (Homo sapiens) [TaxId: 9606]
d1wf0a_ : (SER6) (ASN74) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |TAR DNA-binding protein 43, TDP-43 |Human (Homo sapiens) [TaxId: 9606]
d1x4ba1 : (ARG28) (ARG102) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Heterogeneous nuclear ribonucleoproteins A2/B1 |Human (Homo sapiens) [TaxId: 9606]
d2cqga1 : (SER104) (LEU177) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |TAR DNA-binding protein 43, TDP-43 |Human (Homo sapiens) [TaxId: 9606]
d2dgsa_ : (ASN113) (ARG187) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d2wa_ : (SER191) (ASN259) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2o3da1 : (ASN121) (VAL194) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor, arginine/serine-rich 1, SFRS1 |Human (Homo sapiens) [TaxId: 9606]
d3zzya_ : (ARG185) (PHE257) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58