Protein Concepts Dictionary

Tableau information

Concept source:  d3u8jc_  amino acid (a.a.) range (GLU110)(PHE201)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU110)  (ARG120) E1
	  (THR130)  (GLY133) H2
	  (CYS136)  (SER142) E3
	  (GLU149)  (PRO154) E4
	  (ASP160)  (PHE165) H5
	  (ARG170)  (SER186) E6
	  (GLU190)  (PHE201) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -134.0°   H2                                        
E3      135.2°   53.7°   E3                                 
E4      -68.1°  103.3°  154.1°   E4                          
H5      -62.5°  -72.6°   93.5°  -89.5°   H5                   
E6      110.4°  -95.7°  -42.2° -154.1°  113.2°   E6            
E7      -59.3°  -99.0°  152.5°   17.0°  -72.6°  165.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2zjub_ :   (GLN119)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d3u8jc_ :   (GLU110)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d1uw6b_ :   (GLU110)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d4qaad_ :   (GLU110)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d2zjua_ :   (GLU110)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d2zjuc_ :   (GLU110)  (ARG206)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d3u8jb_ :   (GLN119)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
 d1ux2a_ :   (GLN119)  (PHE201)   [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.96