Protein Concepts Dictionary

Tableau information

Concept source:  d4kg3b_  amino acid (a.a.) range (PRO132)(ILE241)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO132)  (LYS138) E1
	  (ASN141)  (GLN153) H2
	  (GLN166)  (ILE172) E3
	  (LYS175)  (GLY184) E4
	  (ASP200)  (ASP206) E5
	  (ASP206)  (LYS212) H6
	  (MET227)  (ILE241) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      130.5°   H2                                        
E3      -80.8°   84.6°   E3                                 
E4      123.4°  -71.8°  153.7°   E4                          
E5     -121.9° -106.2°  120.9°  -58.1°   E5                   
H6      -95.0°   96.7°   31.7° -138.2°   89.3°   H6            
H7       99.7° -100.0°  173.1°  -28.9°  -53.0° -141.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dkua_ :    (PRO34)  (SER132)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
 d3ef5a_ :    (PRO53)  (ILE139)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Bdellovibrio bacteriovorus [TaxId: 959]
 d3dkue_ :    (PRO34)  (SER132)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
 d4kg3a_ :   (PRO132)  (MET228)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d3dkuf_ :    (PRO34)  (GLY133)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
 d3dkub_ :    (PRO34)  (SER132)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
 d4k6ea_ :   (PRO132)  (LYS242)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4kg3c_ :   (PRO132)  (ILE241)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d3ffua_ :    (PRO53)  (ILE139)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Bdellovibrio bacteriovorus [TaxId: 959]
 d3dkud_ :    (PRO34)  (SER132)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
 d4kg3b_ :   (PRO132)  (ILE241)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d3r03a_ :    (PRO55)  (LEU151)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Rhodospirillum rubrum [TaxId: 269796]
 d3ffub_ :    (PRO53)  (ILE139)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Bdellovibrio bacteriovorus [TaxId: 959]
 d4kg4b_ :   (PRO132)  (MET228)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.113