Protein Concepts Dictionary

Tableau information

Concept source:  d2bufh_  amino acid (a.a.) range (THR163)(ASN219)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR163)  (VAL167) E1
	  (VAL167)  (ASP177) H2
	  (PHE178)  (PRO184) E3
	  (PRO184)  (SER189) E4
	  (GLU192)  (ILE196) E5
	  (ALA198)  (LYS210) H6
	  (LYS213)  (ASN219) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -29.4°   H2                                        
E3      169.6° -144.3°   E3                                 
E4      108.8°  137.7°   75.4°   E4                          
E5      -85.6°  -63.1°  -95.7°  147.8°   E5                   
H6      -52.9°  -77.1°  136.7°   71.6°   97.6°   H6            
E7      117.9°   91.9°  -53.2° -120.1°  -73.2°  168.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2rd5a_ :   (ALA160)  (THR215)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3zzfb_ :   (LYS215)  (GLU271)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1gsja_ :   (VAL122)  (ASP181)   [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Escherichia coli [TaxId: 562]
 d3zzfd_ :   (LYS215)  (GLU271)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3zzfa_ :   (LYS215)  (GLU271)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2hmfa1 :   (LYS170)  (ASP231)   [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Methanococcus jannaschii [TaxId: 2190]
 d2bufg_ :   (GLY157)  (THR218)   [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2v5ha_ :   (ASN153)  (THR208)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Synechococcus elongatus [TaxId: 1140]
 d3c1nc1 :   (LYS170)  (ASP231)   [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2rd5b_ :   (ALA160)  (THR215)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1gs5a_ :   (GLY120)  (ASP181)   [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.73