Protein Concepts Dictionary

Tableau information

Concept source:  d3daha1  amino acid (a.a.) range (LEU7)(PRO93)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU7)   (ASN13) E1
	   (ASN15)   (GLY27) H2
	   (GLY27)   (PHE38) E3
	   (ILE43)   (GLU49) E4
	   (ASP55)   (GLN60) E5
	   (PRO65)   (SER84) H6
	   (ARG87)   (PRO93) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -162.6°   H2                                        
E3      -35.3°  158.9°   E3                                 
E4      154.2°  -15.6°  147.8°   E4                          
E5      -18.8°  148.0°  -52.5°  149.0°   E5                   
H6      146.5°  -43.9°  115.0°  -37.7°  164.9°   H6            
E7      -47.3°  119.9°  -81.0°  125.4°  -28.8°  163.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4rqba_ :    (PRO40)  (LEU133)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 451516]
 d3lpna1 :     (MET1)   (PRO85)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d1dkrb1 :    (LYS10)   (PRO95)   [view usage] : c.61.1.2 |PRTase-like |PRTase-like |Phosphoribosylpyrophosphate synthetase-like |Phosphoribosylpyrophosphate synthetase |Bacillus subtilis [TaxId: 1423]
 d3daha1 :     (LEU7)   (PRO93)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d3ozga_ :    (PHE70)  (LEU173)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 5838]
 d3ozfa_ :    (PHE70)  (LEU173)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 5838]
 d1cjba_ :    (PHE70)  (LEU173)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine PRTase (HGPRTase) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1dkua1 :     (LEU9)   (PRO95)   [view usage] : c.61.1.2 |PRTase-like |PRTase-like |Phosphoribosylpyrophosphate synthetase-like |Phosphoribosylpyrophosphate synthetase |Bacillus subtilis [TaxId: 1423]
 d1u9ya1 :     (ILE2)   (PRO86)   [view usage] : c.61.1.2 |PRTase-like |PRTase-like |Phosphoribosylpyrophosphate synthetase-like |Phosphoribosylpyrophosphate synthetase |Methanocaldococcus jannaschii [TaxId: 2190]
 d4p82a_ :    (ILE35)  (LEU135)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Bacillus subtilis [TaxId: 224308]
 d3ozfb_ :    (PHE70)  (LEU173)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 5838]
 d2d59a_ :    (LYS24)  (TYR109)   [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein PH1109 |Pyrococcus horikoshii [TaxId: 53953]
 d2h06a1 :     (ASN3)   (PRO90)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.61