Tableau information
Concept source: d2p9ga3 amino acid (a.a.) range (VAL337)(TYR410)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL337) (ILE343) E1
(VAL350) (GLY362) H2
(GLY362) (ALA366) E3
(ALA366) (THR372) E4
(GLN375) (GLU384) E5
(GLU387) (ILE400) H6
(ILE404) (TYR410) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 150.9° H2
E3 -88.9° 120.2° E3
E4 -18.4° 168.2° 70.8° E4
E5 166.1° -15.2° 105.1° 175.0° E5
H6 -9.9° 149.1° -89.5° -22.8° 162.2° H6
E7 167.7° -39.9° 80.6° 149.8° -25.4° 169.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1zpva1 : (ILE4) (SER78) [view usage] : d.58.18.7 |Ferredoxin-like |ACT-like |SP0238-like |UPF0237 protein SP0238 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2qmwa2 : (SER185) (MSE259) [view usage] : d.58.18.3 |Ferredoxin-like |ACT-like |Phenylalanine metabolism regulatory domain |Prephenate dehydratase C-terminal domain |Staphylococcus aureus [TaxId: 1280]
d3lgha2 : (ALA66) (LYS140) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2imoa2 : (GLY214) (PRO329) [view usage] : d.58.19.1 |Ferredoxin-like |Bacterial exopeptidase dimerisation domain |Bacterial exopeptidase dimerisation domain |Allantoate amidohydrolase AllC |Escherichia coli [TaxId: 562]
d2cqda1 : (THR11) (LEU85) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding region containing protein 1 |Human (Homo sapiens) [TaxId: 9606]
d2wvbb2 : (ALA66) (SER143) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2wvea2 : (ALA66) (LYS140) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2wvfb2 : (ALA66) (SER143) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2p9ga3 : (VAL337) (TYR410) [view usage] : d.58.18.1 |Ferredoxin-like |ACT-like |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Escherichia coli [TaxId: 562]
d2xzmj_ : (VAL14) (MET116) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2cqia1 : (ARG9) (TRP82) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolysin TIAR |Human (Homo sapiens) [TaxId: 9606]
d2j5aa1 : (TYR10) (GLN99) [view usage] : d.58.14.1 |Ferredoxin-like |Ribosomal protein S6 |Ribosomal protein S6 |Ribosomal protein S6 |Aquifex aeolicus [TaxId: 63363]
d2vd3a2 : (LEU216) (GLU283) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Methanobacterium thermoautotrophicum [TaxId: 187420]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, i.1