Protein Concepts Dictionary

Tableau information

Concept source:  d4m4rb_  amino acid (a.a.) range (LYS73)(ALA142)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS73)   (ASN83) E1
	   (ASN83)   (ALA89) H2
	   (ARG99)  (ASN103) E3
	  (LEU112)  (PHE118) E4
	  (LEU120)  (PHE124) E5
	  (GLY127)  (PRO132) E6
	  (ARG134)  (ALA142) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      147.9°   H2                                        
E3     -173.5°   29.6°   E3                                 
E4       17.0° -143.3° -168.1°   E4                          
E5     -118.1°   81.5°   58.8° -132.5°   E5                   
E6       65.7°  -95.0° -117.4°  -51.3°  176.2°   E6            
E7      148.4°   39.2°  -25.4°  164.5°   42.5° -134.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1shwa_ :    (THR78)  (PRO148)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-a5 |Mouse (Mus musculus) [TaxId: 10090]
 d2wo3b_ :    (MET86)  (THR154)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kgye_ :  (GLN1075) (SER1141)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-b2 ectodomain |Mouse (Mus musculus) [TaxId: 10090]
 d4m4rd_ :    (THR74)  (SER140)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m4rb_ :    (LYS73)  (ALA142)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ikop_ :    (GLN75)  (ILE138)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-b2 ectodomain |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6