Protein Concepts Dictionary

Tableau information

Concept source:  d2qzwa_  amino acid (a.a.) range (GLN121)(ASN199)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN121)  (GLY127) E1
	  (VAL140)  (GLY148) H2
	  (ASN153)  (SER161) E3
	  (THR166)  (GLY172) E4
	  (GLY172)  (ALA177) E5
	  (SER182)  (PRO187) E6
	  (LEU194)  (ASN199) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -63.4°   H2                                        
E3     -127.7°  125.9°   E3                                 
E4       39.2°  -49.1°  166.1°   E4                          
E5      -95.3°   97.8°   37.2°  129.3°   E5                   
E6      -82.1° -109.4°  124.1°  -64.8°  147.6°   E6            
E7       66.3°  113.5°  -63.9°  104.8°  -47.7°  103.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1j71a_ :   (GLN121)  (GLY200)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Yeast (Candida tropicalis) [TaxId: 5482]
 d1psaa_ :   (ASP118)  (ASP195)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Pig (Sus scrofa) [TaxId: 9823]
 d1psna_ :   (ASP118)  (ASP195)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Human (Homo sapiens), isoform 3A [TaxId: 9606]
 d2h6sa_ :   (GLN121)  (ALA204)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1zapa_ :   (GLN121)  (GLY199)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Yeast (Candida albicans) [TaxId: 5476]
 d2qzxa_ :   (LYS121)  (ARG199)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d2qzwa_ :   (GLN121)  (ASN199)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d3fv3a_ :   (GLN115)  (ALA202)   [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]
 d1apte_ :   (ASP119)  (ASP196)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50