Protein Concepts Dictionary

Tableau information

Concept source:  d3spsc_  amino acid (a.a.) range (ARG11)(SER96)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG11)   (LEU17) E1
	   (GLY31)   (ALA50) H2
	   (ALA53)   (SER58) E3
	   (ASP60)   (SER66) E4
	   (LEU74)   (VAL80) E5
	   (THR81)   (ARG85) E6
	   (THR86)   (SER96) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      151.1°   H2                                        
E3      -76.0°  132.0°   E3                                 
E4      -37.8°  132.6°  -72.9°   E4                          
E5      166.3°  -36.1°  101.6°  154.9°   E5                   
E6      128.0°  -56.9°  109.4° -165.5°  -39.6°   E6            
E7      -33.3°  136.2°  -72.4°   -4.5°  159.1° -161.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2qq2b_ :   (GLN217)  (GLU297)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3bjkb_ :    (LEU18)  (LYS103)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Haemophilus influenzae [TaxId: 71421]
 d3bjkc_ :    (LEU18)   (LYS96)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Haemophilus influenzae [TaxId: 71421]
 d4ncpa_ :    (LYS15)  (ILE100)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
 d2q78f_ :     (GLY9)  (SER104)   [view usage] : d.38.1.7 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |TTHA0967-like |Uncharacterized protein TM0581 |Thermotoga maritima [TaxId: 2336]
 d2qq2d_ :   (GLN217)  (VAL306)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3bjkd_ :    (LEU18)   (LYS96)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Haemophilus influenzae [TaxId: 71421]
 d2qq2i_ :   (GLN217)  (VAL306)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3spsc_ :    (ARG11)   (SER96)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Acyl-CoA hydrolase BH0798 |Bacillus halodurans [TaxId: 86665]
 d2hboa1 :    (ALA43)  (ALA126)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein CC3309 |Caulobacter crescentus [TaxId: 155892]
 d3bjka_ :    (LEU18)   (LYS96)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Haemophilus influenzae [TaxId: 71421]
 d3spsa_ :    (ARG11)   (SER96)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Acyl-CoA hydrolase BH0798 |Bacillus halodurans [TaxId: 86665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.38