Protein Concepts Dictionary

Tableau information

Concept source:  d1tp7a_  amino acid (a.a.) range (LYS374)(LYS459)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS374)  (GLN379) E1
	  (LEU386)  (PRO392) E2
	  (VAL393)  (SER399) H3
	  (MSE409)  (GLY424) H4
	  (GLU426)  (SER437) H5
	  (VAL438)  (LEU444) H6
	  (PRO448)  (LYS459) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      143.3°   E2                                        
H3     -131.2°   51.4°   H3                                 
H4       44.8° -122.4° -167.1°   H4                          
H5     -128.3°   43.6°  -13.1°  154.2°   H5                   
H6      -59.5°  155.9°  110.5°  -78.5° -121.6°   H6            
H7      -84.7°  128.1°  120.3°  -72.6°  132.9°   41.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4k4ua_ :   (LYS375)  (ASP459)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human poliovirus 1 [TaxId: 12081]
 d4k4wa_ :   (LYS375)  (SER460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human poliovirus 1 [TaxId: 12081]
 d2ijd12 :   (LYS558)  (SER643)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Poliovirus type 1, strain Mahoney [TaxId: 12080]
 d4r0ea_ :   (LYS375)  (SER460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human poliovirus 1 [TaxId: 12081]
 d1xr5a_ :   (TYR376)  (LEU459)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human rhinovirus 14, HRV-14 [TaxId: 12131]
 d4ikaa_ :   (GLY378)  (GLU460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human enterovirus 71 [TaxId: 39054]
 d4k50a_ :   (LYS374)  (LYS459)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human rhinovirus 16 [TaxId: 31708]
 d3n6la_ :   (LYS376)  (GLU460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human enterovirus 71 [TaxId: 39054]
 d1xr6a_ :   (GLY376)  (PHE460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human rhinovirus 1B, HRV-1B [TaxId: 12129]
 d4k4sa_ :   (PHE377)  (SER460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human poliovirus 1 [TaxId: 12081]
 d4wfxa_ :   (LYS376)  (SER461)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Coxsackievirus b3 [TaxId: 103903]
 d3ol6a_ :   (LYS375)  (SER460)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Poliovirus type 1, strain Mahoney [TaxId: 12080]
 d1tp7a_ :   (LYS374)  (LYS459)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human rhinovirus 16 [TaxId: 31708]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8