Protein Concepts Dictionary

Tableau information

Concept source:  d1qdwa_  amino acid (a.a.) range (GLU33)(GLU117)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU33)   (ASN38) E1
	   (LEU42)   (THR46) E2
	   (GLN47)   (GLN53) H3
	   (ASP61)   (PHE69) H4
	   (GLU75)   (ASP79) E5
	   (ASN81)   (GLY95) H6
	  (PRO105)  (GLU117) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      163.7°   E2                                        
H3       75.9°   88.3°   H3                                 
H4       48.2° -148.1°  121.7°   H4                          
E5      -26.8°  136.9°   51.0°   75.0°   E5                   
H6      161.1°    5.6°   87.9° -149.9°  134.5°   H6            
H7      135.4°  -50.2°  -98.3°  109.7°  137.0°  -55.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1eoda_ :    (GLU66)  (GLU150)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Shaker potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
 d1qdwa_ :    (GLU33)  (GLU117)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Kv1.2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1dsxa_ :    (GLU33)  (GLU117)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Kv1.2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1t1da_ :    (GLU66)  (GLU150)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Shaker potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
 d1eofa_ :    (GLU66)  (GLU150)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Shaker potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
 d1s1gb_ :    (ILE42)  (TYR121)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Potassium channel kv4.3 |Human (Homo sapiens) [TaxId: 9606]
 d1nn7a_ :    (ILE43)  (GLY123)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Potassium channel kv4.2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1exbe_ :    (GLU37)  (GLU121)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |KV1.1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1eoea_ :    (GLU66)  (GLU150)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Shaker potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
 d1a68a_ :    (GLU66)  (GLU150)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Shaker potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
 d1qdva_ :    (GLU33)  (GLU117)   [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |Kv1.2 |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.42