Protein Concepts Dictionary

Tableau information

Concept source:  d1g74a_  amino acid (a.a.) range (GLY6)(PHE64)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY6)   (LEU10) E1
	   (VAL11)   (ASN15) E2
	   (ASN15)   (GLY24) H3
	   (GLY26)   (MET35) H4
	   (PRO38)   (VAL44) E5
	   (ASP47)   (SER55) E6
	   (LYS58)   (PHE64) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      -55.7°   E2                                        
H3      -95.4°   49.6°   H3                                 
H4     -113.8° -152.2°  150.7°   H4                          
E5      158.6°  105.3°   74.8°  -78.0°   E5                   
E6      -34.8°  -86.3° -109.2°   94.9°  166.5°   E6            
E7      139.0°   89.4°   71.5°  -86.5°  -19.8°  173.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2qm9b_ :     (GLY6)   (PHE64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Mouse (Mus musculus) [TaxId: 10090]
 d3f8aa_ :     (ASN6)   (PHE65)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
 d3b2ha_ :     (GLY5)   (GLU62)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
 d3akna_ :     (GLY4)   (GLU63)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4i3da_ :     (GLY7)   (PHE69)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Eel (Anguilla japonica) [TaxId: 7937]
 d4qypa_ :     (GLY6)   (PHE64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1opaa_ :     (GLY6)   (PHE64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinol-binding protein II (CRBP) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1vyfa_ :     (GLY6)   (PHE64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Fatty acid-binding protein Sm14 |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d4nnsa_ :     (GLY6)   (PHE64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Human (Homo sapiens) [TaxId: 9606]
 d3stka_ :     (GLY5)   (GLU62)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
 d4m6sa_ :     (GLY5)   (ASN64)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
 d3b2ka_ :     (GLY5)   (PHE63)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
 d3fa6a_ :     (ASN6)   (PHE65)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
 d2g7ba_ :     (ASN6)   (PHE65)   [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60