Protein Concepts Dictionary

Tableau information

Concept source:  d2j7ab_  amino acid (a.a.) range (VAL234)(SER322)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL234)  (GLY240) E1
	  (LYS248)  (TRP253) E2
	  (ASP258)  (LYS268) H3
	  (PRO292)  (HIS298) E4
	  (TYR301)  (GLY307) H5
	  (GLY307)  (GLY313) H6
	  (ALA317)  (SER322) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      134.0°   E2                                        
H3       -5.3°  134.4°   H3                                 
E4      141.6°  -78.7°  137.7°   E4                          
H5     -138.0°  -19.1°  136.0°  -65.8°   H5                   
H6      -88.2°  -93.0°   83.0°   67.5°  -75.2°   H6            
H7     -112.5°  112.5° -112.8°  -48.8°  108.4°  100.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j7ad_ :   (VAL234)  (SER322)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
 d2j7ab_ :   (VAL234)  (SER322)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
 d2vr0e_ :   (VAL234)  (SER322)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
 d1oahb_ :   (VAL235)  (GLN323)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c nitrite reductase |Desulfovibrio desulfuricans [TaxId: 876]
 d2j7aa_ :   (VAL234)  (SER322)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
 d1qdba_ :   (GLU216)  (PRO306)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c nitrite reductase |Sulfurospirillum deleyianum [TaxId: 65553]
 d2rdza_ :   (GLU215)  (PRO288)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Escherichia coli [TaxId: 562]
 d2j7ah_ :   (VAL234)  (SER322)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.138