Protein Concepts Dictionary

Tableau information

Concept source:  d3w0la2  amino acid (a.a.) range (GLU214)(ILE286)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU214)  (GLY220) E1
	  (GLY222)  (MET228) E2
	  (VAL234)  (GLU238) H3
	  (MET244)  (GLU249) E4
	  (GLU249)  (ASP255) H5
	  (GLU265)  (SER274) H6
	  (GLN280)  (ILE286) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      178.4°   E2                                        
H3      118.4°  -61.3°   H3                                 
E4      -18.2°  163.4°  121.7°   E4                          
H5      -70.5°  111.2°  111.5°   52.3°   H5                   
H6       81.9°  -97.4°  -38.0°   90.2° -110.7°   H6            
H7      -68.4°  110.8° -139.3°  -77.9°  108.3°  118.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3id8a2 :   (GLU221)  (ILE293)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ig8a2 :   (MET228)  (SER305)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
 d3h1vx2 :   (GLU221)  (ILE293)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
 d1bg3a2 :   (GLU225)  (VAL297)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2nzta4 :   (GLU673)  (ILE745)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1czan2 :   (GLU225)  (VAL297)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d2yhxa_ :   (MET206)  (SER280)   [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]
 d4foia2 :   (GLU225)  (VAL297)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d1hkba2 :   (GLU225)  (VAL297)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d2nzta2 :   (GLU225)  (ILE297)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b8ax2 :   (MET228)  (THR305)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55,    i.12