Tableau information
Concept source: d1zr5b_ amino acid (a.a.) range (ALA256)(LYS366)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA256) (VAL260) E1
(LYS269) (ASN275) E2
(CYS284) (LYS303) H3
(LYS305) (SER311) E4
(PRO320) (THR339) H5
(THR346) (PHE352) E6
(SER354) (LYS366) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.3° E2
H3 -21.6° 158.3° H3
E4 131.2° -40.6° 152.8° E4
H5 -63.9° 122.4° -42.9° 163.1° H5
E6 107.3° -63.7° 128.7° -24.3° 170.3° E6
H7 -98.4° 97.7° -76.9° 129.6° -39.0° -150.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1o5za1 : (PHE296) (MET372) [view usage] : c.59.1.2 |MurD-like peptide ligases, peptide-binding domain |MurD-like peptide ligases, peptide-binding domain |Folylpolyglutamate synthetase, C-terminal domain |Folylpolyglutamate synthetase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2dy1a2 : (ARG63) (THR152) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor G (EF-G), N-terminal (G) domain |Thermus thermophilus, EF-G-2 [TaxId: 274]
d1thnb_ : (ALA4) (GLY95) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Bacillus stearothermophilus [TaxId: 1422]
d1tild_ : (SER2) (MET93) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Bacillus stearothermophilus [TaxId: 1422]
d1rrvb_ : (GLU278) (GLY345) [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-vancosaminyltransferase GftD |Amycolatopsis orientalis [TaxId: 31958]
d3ekea_ : (GLN76) (CYS171) [view usage] : c.50.1.0 |Macro domain-like |Macro domain-like |automated matches |automated matches |Avian infectious bronchitis virus (strain beaudette) [TaxId: 11120]
d1gyma_ : (THR183) (LEU295) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d1rrva_ : (GLU278) (GLY345) [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-vancosaminyltransferase GftD |Amycolatopsis orientalis [TaxId: 31958]
d2xd7a_ : (ALA258) (ALA367) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d6ptda_ : (THR183) (LEU295) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d1yd9b_ : (ALA79) (ALA188) [view usage] : c.50.1.0 |Macro domain-like |Macro domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1r6ha_ : (PRO12) (PRO99) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Protein tyrosine phosphatase type IVa |Human (Homo sapiens), pr-3 [TaxId: 9606]
d1yd9c_ : (ALA79) (LEU190) [view usage] : c.50.1.0 |Macro domain-like |Macro domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wdta2 : (ARG63) (THR152) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor G (EF-G), N-terminal (G) domain |Thermus thermophilus, EF-G-2 [TaxId: 274]
d2p9ca1 : (GLU183) (ASP245) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d1zr5b_ : (ALA256) (LYS366) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |Histone macro-H2a1.1 |Human (Homo sapiens) [TaxId: 9606]
d2xd7c_ : (ALA258) (ALA367) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sboa_ : (LEU4) (HIS96) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.45, c.37, c.87, c.13, c.50, c.59