Protein Concepts Dictionary

Tableau information

Concept source:  d2ikoa_  amino acid (a.a.) range (LYS289)(LEU333)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS289)  (ALA294) E1
	  (HIS296)  (PRO302) E2
	  (PRO302)  (TRP308) H3
	  (TRP308)  (ALA312) E4
	  (ALA312)  (PHE318) H5
	  (TYR319)  (ARG324) E6
	  (ARG328)  (LEU333) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      -27.5°   E2                                        
H3      135.1° -154.2°   H3                                 
E4      108.8°  124.8°  -71.8°   E4                          
H5      -75.0° -102.4°   65.5°  -63.1°   H5                   
E6       29.4°    6.5°  160.4° -119.7°  104.1°   E6            
E7      143.4° -170.8°  -22.1°   52.2°   68.5°  170.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ikoa_ :   (LYS289)  (LEU333)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d1dp5a_ :   (SER281)  (LYS324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
 d2i4qa_ :   (LYS289)  (LEU333)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d2g1na_ :   (LYS289)  (LEU333)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d1fq4a_ :   (SER281)  (LYS324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
 d2ikua_ :   (LYS289)  (LEU333)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d3sfca_ :   (LYS280)  (LEU324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50