Protein Concepts Dictionary

Tableau information

Concept source:  d4g57a_  amino acid (a.a.) range (LEU7)(LYS136)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU7)   (PRO11) E1
	   (MET32)   (LEU36) E2
	   (TYR54)   (ALA69) H3
	   (LYS71)   (ASP77) E4
	   (GLY86)   (ASP95) E5
	   (VAL99)  (GLY107) H6
	  (GLU122)  (LYS136) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -130.1°   E2                                        
H3      -71.5°  120.0°   H3                                 
E4      150.3°   73.2°  116.1°   E4                          
E5      -78.9°  -67.0°   65.2°  130.8°   E5                   
H6     -103.1°  -36.9°  143.9°  -86.6°   78.7°   H6            
H7      -76.7°  -57.0°  126.0° -113.2°   66.7°  -27.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2f0ua_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0ta_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4k8ja_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4g57a_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3d8ga_ :     (LEU7)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4k14a_ :     (LYS6)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4qb4a_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1snca_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1kdba_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0pa_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40