Protein Concepts Dictionary

Tableau information

Concept source:  d2pmia_  amino acid (a.a.) range (ALA19)(LYS128)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA19)   (LYS23) E1
	   (VAL31)   (ASP41) E2
	   (PRO47)   (LEU60) H3
	   (VAL66)   (GLU75) E4
	   (LYS77)   (GLU83) E5
	   (ASP88)   (THR97) H6
	  (LEU107)  (LYS128) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      155.1°   E2                                        
H3      -49.9° -144.0°   H3                                 
E4      113.1°  -42.0° -137.0°   E4                          
E5      -49.3°  155.6°   32.5°  162.0°   E5                   
H6      -61.2°  122.6°  -91.3°  115.4°  -62.1°   H6            
H7      127.2°  -47.0°   99.1°  -57.0°  127.5° -169.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3my0n_ :   (GLY214)  (HIS314)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tvoa_ :    (GLY37)  (ASN144)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pxfa_ :    (GLY16)  (ARG122)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d2b53a_ :    (GLY16)  (ARG122)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d3qyia_ :    (GLY35)  (ASN142)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4acca_ :    (GLY68)  (TYR161)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3u4wa_ :   (GLY279)  (ASN381)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-src tyrosine kinase |Chicken (Gallus gallus) [TaxId: 9031]
 d2pmia_ :    (ALA19)  (LYS128)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4hokm_ :    (GLY21)  (ASN123)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qrka_ :   (GLU258)  (ASN358)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gcja_ :    (TYR19)  (ARG122)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
 d2j51a_ :    (GLY46)  (LYS150)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |STE20-like serine/threonine-protein kinase, SLK |Human (Homo sapiens) [TaxId: 9606]
 d3tt0a_ :   (ASN506)  (LYS618)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Fibroblast growth factor receptor 1 |Human (Homo sapiens) [TaxId: 9606]
 d3o23a_ :  (MET1012) (LYS1130)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Insulin-like growth factor 1 receptor |Human (Homo sapiens) [TaxId: 9606]
 d3q4ub_ :   (GLY220)  (HIS320)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v0ba_ :    (GLY16)  (ARG120)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3my0d_ :   (GLY214)  (HIS314)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1blxa_ :    (GLY25)  (ARG140)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK6 |Human (Homo sapiens) [TaxId: 9606]
 d3my0c_ :   (GLY214)  (HIS314)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2weia_ :    (GLY88)  (ILE178)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d2ogva_ :   (ASP608)  (SER759)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m8ta_ :   (TYR433)  (GLY534)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3my0o_ :   (GLY214)  (HIS314)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4maoa_ :   (TYR433)  (GLY534)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144