Protein Concepts Dictionary

Tableau information

Concept source:  d4eqna_  amino acid (a.a.) range (LYS6)(LYS136)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS6)   (PRO11) E1
	   (THR33)   (LEU38) E2
	   (TYR54)   (ALA69) H3
	   (LYS71)   (ASP77) E4
	   (GLY86)   (ASP95) E5
	   (MET98)  (GLY107) H6
	  (HIS121)  (LYS136) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -149.5°   E2                                        
H3      -78.3°  107.8°   H3                                 
E4      143.1°   62.6°  114.7°   E4                          
E5      -85.2°  -71.8°   64.6°  131.7°   E5                   
H6     -100.2°  -56.8°  143.8°  -88.3°   79.2°   H6            
H7      -77.5°  -75.7°  128.6° -111.8°   68.7°  -24.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qola_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4kd3a_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ihza_ :     (LYS6)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3sr1a_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2eyoa_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4n9ta_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0la_ :     (LEU7)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4kjna_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3mvva_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4iuna_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4eqna_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4j1ma_ :     (LEU7)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d1f2ya_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1stba_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3eroa_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4h7ba_ :     (LYS6)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0oa_ :     (LYS6)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0ia_ :     (LYS6)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ey6a_ :     (LEU7)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40