Protein Concepts Dictionary

Tableau information

Concept source:  d4ky7a_  amino acid (a.a.) range (ASP21)(LYS136)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP21)   (MET26) E1
	   (MET32)   (LEU36) E2
	   (TYR54)   (ALA69) H3
	   (LYS71)   (PHE76) E4
	   (GLY86)   (ASP95) E5
	   (MET98)  (GLY107) H6
	  (HIS121)  (LYS136) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      150.0°   E2                                        
H3      -34.1°  116.5°   H3                                 
E4     -105.5°   78.9° -113.8°   E4                          
E5       94.4°  -65.6°   65.5°  136.3°   E5                   
H6      159.8°  -42.8°  144.9°  -91.8°   79.4°   H6            
H7      135.3°  -59.9°  128.0° -115.5°   68.0°  -24.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ky7a_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4trda_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4pmca_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3heja_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1nsns_ :    (THR22)  (HIS121)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3lx0a_ :    (ASN21)  (GLU122)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2rbma_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3sk4a_ :    (ASN21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3shla_ :    (ASP21)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40