Protein Concepts Dictionary

Tableau information

Concept source:  d2wnsa_  amino acid (a.a.) range (GLU117)(VAL173)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU117)  (GLU123) E1
	  (ASP124)  (SER128) E2
	  (SER130)  (GLY143) H3
	  (GLY143)  (LEU152) E4
	  (LEU152)  (GLU156) E5
	  (GLY159)  (GLY167) H6
	  (GLY167)  (VAL173) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2       88.9°   E2                                        
H3      164.0°  -98.4°   H3                                 
E4      -26.7° -103.6°  156.5°   E4                          
E5       74.4°  -17.8° -115.0°  -86.2°   E5                   
H6      168.8°   83.0°  -16.8° -164.0°  -98.8°   H6            
E7      -45.1° -129.7°  131.4°  -26.2° -112.4°  145.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ps1a_ :   (ARG126)  (ILE192)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1zn7a_ :   (ARG122)  (LEU176)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Human (Homo sapiens) [TaxId: 9606]
 d3dmpa_ :   (ILE130)  (ALA188)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d1bd3a_ :   (TRP159)  (ALA217)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Toxoplasma gondii [TaxId: 5811]
 d1vsta_ :   (ASP134)  (VAL191)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Sulfolobus solfataricus [TaxId: 2287]
 d2b3zd2 :    (ALA65)  (GLY124)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
 d2wnsa_ :   (GLU117)  (VAL173)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1lh0a_ :  (ARG1119) (ILE1181)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Orotate PRTase |Salmonella typhimurium [TaxId: 90371]
 d2fxva_ :   (HIS119)  (LEU175)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine phosphoribosyltransferase |Bacillus subtilis [TaxId: 1423]
 d4ohcb_ :   (ARG125)  (LEU182)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3mbia2 :   (LYS205)  (THR261)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d4ohcd_ :   (ARG125)  (LEU182)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1i5ea_ :   (ASP126)  (ALA182)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Bacillus caldolyticus [TaxId: 1394]
 d3lpna2 :   (LYS205)  (THR261)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d3lpnb2 :   (LYS205)  (THR261)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d1orea_ :   (ARG122)  (LEU176)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Human (Homo sapiens) [TaxId: 9606]
 d1mzva_ :   (ARG141)  (LEU203)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Leishmania tarentolae [TaxId: 5689]
 d1jlsc_ :   (TRP159)  (ALA217)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Uracil PRTase, Upp |Toxoplasma gondii [TaxId: 5811]
 d2b3za2 :    (ALA65)  (GLY124)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
 d4ohca_ :   (ARG125)  (LEU182)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.97,    c.61