Tableau information
Concept source: d2bkfa1 amino acid (a.a.) range (VAL5)(GLU84)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL5) (PHE11) E1
(ASN13) (LEU19) E2
(TRP28) (PHE39) H3
(THR43) (LEU49) E4
(GLU54) (SER60) E5
(SER60) (GLN74) H6
(GLN79) (GLU84) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.0° E2
H3 -41.7° 137.9° H3
E4 122.1° -74.9° 109.3° E4
E5 -104.2° 58.9° -108.7° 133.4° E5
H6 114.3° -80.2° 85.0° 30.7° -132.6° H6
E7 -39.8° 123.7° -65.9° 158.3° -65.1° -150.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2bwes1 : (ASN4) (LYS72) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |DSK2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1wmhb_ : (SER14) (ARG95) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Partitioning defective-6 homolog alpha, PAR-6 alpha |Human (Homo sapiens) [TaxId: 9606]
d1oeyc_ : (TYR352) (TRP425) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) |Human (Homo sapiens) [TaxId: 9606]
d1oeyb_ : (ALA351) (TRP425) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) |Human (Homo sapiens) [TaxId: 9606]
d2nptb1 : (ARG45) (ILE121) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Mitogen-activated protein kinase kinase kinase 2, MEKK 2 |Human (Homo sapiens) [TaxId: 9606]
d2bweu_ : (ASN4) (LYS72) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2o2vb1 : (VAL45) (SER122) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Mitogen-activated protein kinase kinase kinase 3, MEKK 3 |Human (Homo sapiens) [TaxId: 9606]
d1u4aa1 : (ASP15) (PHE86) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like protein smt3a, SUMO-3 |Human (Homo sapiens) [TaxId: 9606]
d1wi0a_ : (VAL16) (GLY109) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Mitogen activated protein kinase kinase 5, Map2k5 |Mouse (Mus musculus) [TaxId: 10090]
d1wmha_ : (ARG18) (PRO98) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Protein kinase C, iota type |Human (Homo sapiens) [TaxId: 9606]
d2nptd_ : (LYS39) (ILE121) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Mitogen-activated protein kinase kinase kinase 2, MEKK 2 |Human (Homo sapiens) [TaxId: 9606]
d2g4sa_ : (PRO3) (GLU84) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oeyd_ : (ALA351) (TRP425) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) |Human (Homo sapiens) [TaxId: 9606]
d2bkfa1 : (VAL5) (GLU84) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.15