Protein Concepts Dictionary

Tableau information

Concept source:  d1ey4a_  amino acid (a.a.) range (LYS6)(GLY107)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS6)   (PRO11) E1
	   (THR33)   (LEU38) E2
	   (TYR54)   (ALA69) H3
	   (LYS71)   (ASP77) E4
	   (GLY86)   (TYR91) E5
	   (TYR91)   (ASP95) E6
	   (VAL99)  (GLY107) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -140.1°   E2                                        
H3      -79.7°  110.2°   H3                                 
E4      148.3°   63.3°  116.1°   E4                          
E5     -110.0°  -41.8°   77.6°  100.6°   E5                   
E6      -53.4° -100.6°   53.1°  158.1°   60.0°   E6            
H7      -95.6°  -52.6°  142.9°  -87.1°  -69.5°   94.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4rkba_ :     (LEU7)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1f2za_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3c1ea_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d4laaa_ :     (LEU7)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d3nxwa_ :     (LEU7)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2oeoa_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2m00a_ :     (LEU7)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1f2ma_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ey4a_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2eyla_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3d6ca_ :     (LEU7)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0ma_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ey0a_ :     (LYS6)  (GLY107)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40