Tableau information
Concept source: d3e16b_ amino acid (a.a.) range (CYS42)(LEU108)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEHEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS42) (SER48) E1
(GLN50) (SER54) E2
(ALA55) (PRO58) H3
(ALA63) (GLY69) E4
(ASP79) (THR84) E5
(LYS86) (HIS91) E6
(ASP102) (LEU108) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 143.8° E2
H3 -118.4° 93.4° H3
E4 -62.4° 103.4° 142.6° E4
E5 103.7° -79.3° -55.4° 160.2° E5
E6 101.6° -43.0° -122.9° 90.8° -77.7° E6
E7 -59.2° 156.1° 70.8° -81.4° 104.2° 160.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hava_ : (MET29) (PRO91) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
d1g2la_ : (CYS42) (ARG108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Human (Homo sapiens) [TaxId: 9606]
d1l4da_ : (CYS588) (LEU652) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Plasmin(ogen), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1faxa_ : (CYS42) (ARG107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Human (Homo sapiens) [TaxId: 9606]
d4dvau_ : (CYS42) (LYS110) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Urokinase-type plasminogen activator (LMW U-PA), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1mzaa_ : (CYS42) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme K |Human (Homo sapiens) [TaxId: 9606]
d1fona_ : (CYS28) (LYS98) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Procarboxypeptidase A-S6 subunit III (zymogen E) |Cow (Bos taurus) [TaxId: 9913]
d1hage_ : (CYS42) (LYS107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Thrombin |Human (Homo sapiens) [TaxId: 9606]
d3govb_ : (CYS475) (LEU558) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a5ia_ : (CYS42) (ASP110) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Single chain tissue plasminogen activator |Vampire bat (Desmodus rotundus) [TaxId: 9430]
d1elta_ : (CYS42) (ARG107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Atlantic salmon (Salmo salar) [TaxId: 8030]
d1haxb_ : (CYS42) (ARG107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
d2f9oa_ : (CYS42) (GLU107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bdaa_ : (CYS42) (GLN107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Single chain tissue plasminogen activator |Human (Homo sapiens) [TaxId: 9606]
d1mkwk_ : (CYS42) (LYS107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Thrombin |Cow (Bos taurus) [TaxId: 9913]
d2f91a1 : (CYS42) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]
d2f9na_ : (CYS42) (GLU107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2anya_ : (CYS42) (LYS107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47