Protein Concepts Dictionary

Tableau information

Concept source:  d4dgjc_  amino acid (a.a.) range (ARG124)(ALA221)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG124)  (GLY130) E1
	  (LEU144)  (SER153) E2
	  (SER153)  (GLN159) H3
	  (ASN169)  (GLY174) E4
	  (LEU191)  (ASN196) E5
	  (ARG198)  (GLY203) E6
	  (ASN215)  (ALA221) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      143.9°   E2                                        
H3      -57.9°  100.4°   H3                                 
E4      -90.3°  110.5°   70.8°   E4                          
E5      132.4°  -78.9°  158.2°   88.9°   E5                   
E6      -70.5°   76.1°  -34.9° -102.6°  154.9°   E6            
E7       73.5° -100.0° -120.6°  145.1°  -80.6° -100.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1nu9a_ :   (TYR134)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Thrombin |Human (Homo sapiens) [TaxId: 9606]
 d1g2la_ :   (LYS138)  (THR234)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Human (Homo sapiens) [TaxId: 9606]
 d3i78a_ :   (GLY134)  (THR229)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
 d1xxda_ :   (ASP135)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d1zhpa_ :   (ASP135)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d1a0la_ :   (PRO135)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |beta-Tryptase |Human (Homo sapiens) [TaxId: 9606]
 d2oq5a_ :   (ASP134)  (THR229)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2f9oa_ :   (PRO135)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pfxc_ :   (GLY134)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor IXa, protease domain |Pig (Sus scrofa) [TaxId: 9823]
 d3gyma_ :   (LEU134)  (THR229)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2anya_ :   (THR134)  (THR229)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47