Protein Concepts Dictionary

Tableau information

Concept source:  d1trqa_  amino acid (a.a.) range (ASP3)(GLU102)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP3)    (GLY7) E1
	    (SER8)   (SER12) E2
	   (SER12)   (GLY30) H3
	   (PRO55)   (PRO60) E4
	   (ALA75)   (ASN81) E5
	   (GLY88)   (HIS92) E6
	   (ASN98)  (GLU102) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      163.4°   E2                                        
H3       84.0°  -80.2°   H3                                 
E4      -70.4°  113.5°  119.5°   E4                          
E5      136.3°  -36.5°  -62.3°  149.6°   E5                   
E6      -15.4°  159.3°   90.9°  -55.2°  149.6°   E6            
E7      146.5°  -50.0° -126.5°   99.9°  -65.5°  142.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d7rnta_ :     (ASP3)  (THR104)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1lowa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d2aada_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1b2ma_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d4rnta_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1q9ea_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d4bira_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d3bira_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1ttoa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1bu4a_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1rdsa_ :     (GLU4)  (SER104)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase Ms |Molsin (Aspergillus saitoi) [TaxId: 5063]
 d1rn1b_ :     (ASP3)  (THR104)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1loya_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d3hoha_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1trpa_ :     (ASP3)  (THR104)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1rhla_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1i3fa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1trqa_ :     (ASP3)  (GLU102)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d1rgka_ :     (ASP3)  (THR104)   [view usage] : d.1.1.4 |Microbial ribonucleases |Microbial ribonucleases |Fungal ribonucleases |RNase T1 |Fungus (Aspergillus oryzae) [TaxId: 5062]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.1