Protein Concepts Dictionary

Tableau information

Concept source:  d2ox4a1  amino acid (a.a.) range (SER0)(GLY117)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER0)   (HIS10) E1
	   (GLY18)   (THR28) E2
	   (GLY31)   (GLU37) E3
	   (GLY45)   (ILE61) H4
	   (THR68)   (LYS78) H5
	   (VAL88)  (ASN109) H6
	  (VAL112)  (GLY117) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      162.0°   E2                                        
E3      -41.8°  154.2°   E3                                 
H4     -161.7°   -7.2°  149.0°   H4                          
H5      -56.8°  121.0°  -53.2°  114.3°   H5                   
H6      129.5°  -47.7°  142.2°  -54.8°  164.3°   H6            
H7     -120.0°   75.5°  -78.8°   71.2°  -84.2°  100.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qtpa1 :     (VAL6)  (LEU135)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
 d3twbc1 :    (VAL11)  (GLY117)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Salmonella enterica [TaxId: 550537]
 d1te6a2 :     (GLU3)  (ALA137)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase |Human (Homo sapiens), gamma isoform [TaxId: 9606]
 d4h2ha1 :     (SER0)  (GLY124)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pelagibaca bermudensis [TaxId: 314265]
 d1pdya2 :     (THR3)  (ASN138)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase |European lobster (Homarus vulgaris) [TaxId: 6707]
 d2ptxa2 :     (GLN4)  (ALA136)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2ptwa2 :     (GLN4)  (GLY137)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2pmqa1 :     (GLU5)  (GLY124)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Roseovarius sp. [TaxId: 314265]
 d3tjia1 :     (THR2)  (GLY114)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Enterobacter sp. [TaxId: 399742]
 d2ox4a1 :     (SER0)  (GLY117)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
 d4mmwa1 :     (VAL6)  (GLY125)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d3zlfa1 :     (VAL7)  (LEU134)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
 d4gisa1 :     (LYS3)  (GLY114)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Vibrio harveyi [TaxId: 673519]
 d3tw9a1 :     (ASN5)  (GLY117)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Salmonella enterica [TaxId: 550537]
 d4il2b1 :    (VAL15)  (GLY121)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |D-mannonate dehydratase |Escherichia coli [TaxId: 199310]
 d4hcha1 :     (VAL6)  (GLY125)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d2xgza1 :     (VAL5)  (SER137)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4hnla1 :     (THR2)  (GLY114)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Enterococcus gallinarum [TaxId: 565653]
 d3qn3a1 :     (GLU5)  (GLY134)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d4hcda1 :     (VAL6)  (GLY125)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4ihca1 :     (LYS3)  (GLY115)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Mandelate racemase |Dickeya dadantii [TaxId: 579405]
 d4dhgc1 :     (GLU5)  (GLY133)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Thermobispora bispora [TaxId: 469371]
 d3t6cb1 :     (VAL9)  (GLY115)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pantoea ananatis [TaxId: 706191]
 d1rvka2 :     (VAL6)  (GLY125)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Hypothetical protein Atu3453 |Agrobacterium tumefaciens [TaxId: 358]
 d3twbb1 :    (VAL11)  (GLY117)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Salmonella enterica [TaxId: 550537]
 d4ropa1 :    (GLU11)  (GLY139)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Synechococcus elongatus [TaxId: 269084]
 d2xh4a1 :     (VAL5)  (SER137)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4h2hb1 :     (GLU5)  (GLY124)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pelagibaca bermudensis [TaxId: 314265]
 d3qtpb1 :     (GLN4)  (GLU134)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
 d3gy1a1 :     (GLU4)  (GLY116)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Mandelate racemase |Clostridium beijerinckii [TaxId: 290402]
 d4a3ra1 :     (VAL7)  (LEU134)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3t6ca1 :     (ASN3)  (GLY115)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pantoea ananatis [TaxId: 706191]
 d4girb1 :     (ASN2)  (GLY114)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Vibrio harveyi [TaxId: 673519]
 d2pa6a1 :    (ASP13)  (GLY141)   [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase |Methanocaldococcus jannaschii [TaxId: 2190]
 d2psna1 :     (LEU3)  (ALA137)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.54