Protein Concepts Dictionary

Tableau information

Concept source:  d4bgza_  amino acid (a.a.) range (LEU71)(SER132)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU71)   (GLU75) E1
	   (TYR78)   (LYS82) E2
	   (PRO92)   (ASP97) E3
	   (TYR98)  (SER106) H4
	  (ASN109)  (GLN115) E5
	  (PRO118)  (SER123) H6
	  (GLU126)  (SER132) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      137.8°   E2                                        
E3      -31.5° -146.1°   E3                                 
H4      -40.6° -143.0°   59.0°   H4                          
E5     -145.9°   76.2°  121.4°  117.1°   E5                   
H6      136.8°  -72.8°  105.2°  138.1°   33.8°   H6            
H7       85.2°  -52.8° -105.6° -103.2° -128.9°  118.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bgze_ :    (LEU71)  (SER132)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza virus [TaxId: 375457]
 d3s11c_ :    (ILE80)  (SER136)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d4k65a_ :    (ILE75)  (SER136)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4mhia_ :    (ILE80)  (SER136)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3gbmc_ :    (ILE80)  (SER136)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/viet nam/1203/2004(h5n1)) [TaxId: 284218]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19