Protein Concepts Dictionary

Tableau information

Concept source:  d1u37a1  amino acid (a.a.) range (ASP20)(ASN102)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP20)   (GLN26) E1
	   (GLY32)   (GLU37) E2
	   (THR46)   (ASN51) E3
	   (GLY56)   (GLY62) H4
	   (GLY67)   (SER72) E5
	   (LEU83)   (GLN96) H6
	   (SER97)  (ASN102) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -139.4°   E2                                        
E3       45.8°  141.7°   E3                                 
H4      125.1°   95.5°  -93.0°   H4                          
E5      -87.2°  -89.0°  126.5°   98.3°   E5                   
H6      -50.8°  162.2°  -55.7°   77.5°   76.1°   H6            
E7      167.1°   31.6° -131.5°  -64.8°  100.1°  141.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cssa1 :    (ASP17)  (PRO115)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Regulating synaptic membrane exocytosis protein 1, RIMS1 |Human (Homo sapiens) [TaxId: 9606]
 d1zuba1 :   (ARG609)  (VAL703)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Regulating synaptic membrane exocytosis protein 1, RIMS1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1va8a1 :    (GLU24)  (LEU104)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Maguk p55 subfamily member 5 |Mouse (Mus musculus) [TaxId: 10090]
 d1b8qa_ :    (ILE10)   (GLY93)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Neuronal nitric oxide synthase, NNOS |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1whda_ :    (LEU17)   (GLY96)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Regulator of G-protein signaling 3, RGS3 |Mouse (Mus musculus) [TaxId: 10090]
 d1ufxa_ :     (THR8)   (ASN97)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |KIAA1526 protein |Human (Homo sapiens) [TaxId: 9606]
 d1gm1a_ :    (ASP12)   (GLY99)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Phosphatase hPTP1e |Mouse (Mus musculus) [TaxId: 10090]
 d2jxoa_ :   (ARG151)  (LEU229)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yt7a_ :     (ASN9)   (PRO99)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1x6da1 :    (GLY15)   (VAL99)   [view usage] : b.36.1.2 |PDZ domain-like |PDZ domain-like |Interleukin 16 |Interleukin 16 |Human (Homo sapiens) [TaxId: 9606]
 d2d90a_ :     (ARG8)   (LEU86)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2ehra_ :    (PRO15)  (SER110)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1u37a1 :    (ASP20)  (ASN102)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) |Human (Homo sapiens) [TaxId: 9606]
 d2exga_ :    (GLU11)   (GLU93)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.36