Protein Concepts Dictionary

Tableau information

Concept source:  d2wpms_  amino acid (a.a.) range (GLN30)(HIS91)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN30)   (LYS36) E1
	   (CYS42)   (ASN48) E2
	   (TRP51)   (ALA55) E3
	   (ALA55)   (GLU60) H4
	   (LYS62)   (GLY69) E5
	   (THR79)   (ASN84) E6
	   (ILE86)   (HIS91) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      126.9°   E2                                        
E3      -71.9°  149.0°   E3                                 
H4       21.9° -109.2°   93.4°   H4                          
E5      151.7°  -67.2°  108.8°  139.6°   E5                   
E6      -44.7°   98.1°  -78.9°  -52.0°  162.8°   E6            
E7     -109.4°   98.1°  -50.9° -129.2°   90.1°  -83.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4is5a_ :    (GLN30)   (HIS91)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Matriptase MTSP1 |Human (Homo sapiens) [TaxId: 9606]
 d3beua_ :    (PHE29)   (ALA91)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
 d1sgta_ :    (PHE29)   (ALA91)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
 d1mbmb_ :    (GLY13)   (LYS62)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NSP4 proteinase |Equine arteritis virus, EAV [TaxId: 11047]
 d1mbmc_ :    (GLY13)   (LYS62)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NSP4 proteinase |Equine arteritis virus, EAV [TaxId: 11047]
 d3sqee_ :    (TRP29)   (HIS91)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Thrombin |Human (Homo sapiens) [TaxId: 9606]
 d1mbma_ :    (GLY13)   (LYS62)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NSP4 proteinase |Equine arteritis virus, EAV [TaxId: 11047]
 d1z8ga1 :   (TRP176)  (HIS240)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Hepsin, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1mbmd_ :    (GLY13)   (LYS62)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NSP4 proteinase |Equine arteritis virus, EAV [TaxId: 11047]
 d3fvfb_ :    (TRP29)   (HIS91)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1owea_ :    (GLY27)   (HIS96)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Urokinase-type plasminogen activator (LMW U-PA), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3gyma_ :    (TRP29)   (HIS91)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3dfla_ :    (TRP58)  (HIS123)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1c1ma_ :    (SER36)   (HIS91)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
 d3kl6a_ :    (TRP29)   (HIS91)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Human (Homo sapiens) [TaxId: 9606]
 d1owda_ :    (GLY24)   (HIS83)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Urokinase-type plasminogen activator (LMW U-PA), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1dsta_ :    (TYR29)   (HIS91)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Factor D |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47