Protein Concepts Dictionary

Tableau information

Concept source:  d3so0c_  amino acid (a.a.) range (ALA4)(SER68)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA4)   (ASP10) E1
	   (ALA16)   (GLN21) E2
	   (GLY23)   (LEU27) E3
	   (LEU27)   (ALA33) H4
	   (SER41)   (PRO46) E5
	   (TRP49)   (GLU55) E6
	   (THR62)   (SER68) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      159.1°   E2                                        
E3      -28.6°  140.4°   E3                                 
H4      -82.4°  118.5°  -92.4°   H4                          
E5      160.8°  -34.9°  168.7°   86.5°   E5                   
E6      -40.9°  123.6°  -18.2° -110.3°  157.9°   E6            
E7      116.0°  -81.1°  137.2°   47.5°  -46.3°  155.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hzbb_ :     (VAL2)   (SER66)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Flavobacterium johnsoniae [TaxId: 376686]
 d3hzbc_ :     (VAL2)   (SER66)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Flavobacterium johnsoniae [TaxId: 376686]
 d3so0b_ :     (ALA4)   (SER68)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Clostridium beijerinckii [TaxId: 290402]
 d3so0d_ :     (ALA4)   (SER68)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Clostridium beijerinckii [TaxId: 290402]
 d1prra1 :     (MET1)   (VAL65)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |Protein S |Myxococcus xanthus [TaxId: 34]
 d3so0c_ :     (ALA4)   (SER68)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Clostridium beijerinckii [TaxId: 290402]
 d1e7na_ :    (LEU-2)   (LYS59)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |beta-Crystallin |Mouse (Mus musculus) [TaxId: 10090]
 d3snza_ :     (VAL5)   (SER68)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Clostridium beijerinckii [TaxId: 290402]
 d3hzbd_ :     (VAL2)   (SER66)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Flavobacterium johnsoniae [TaxId: 376686]
 d3hzba_ :     (VAL2)   (SER66)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Flavobacterium johnsoniae [TaxId: 376686]
 d3i9ha_ :     (ALA3)   (SER67)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Clostridium beijerinckii [TaxId: 290402]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.11