Tableau information
Concept source: d4orgl1 amino acid (a.a.) range (VAL3)(SER56)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL3) (PRO7) E1
(PRO8) (ALA14) E2
(LYS18) (SER24) E3
(SER27) (ASN31) H4
(PHE32) (GLN37) E5
(ALA43) (ILE48) E6
(ASN52) (SER56) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 28.7° E2
E3 158.4° 169.6° E3
H4 -82.5° -53.8° 117.9° H4
E5 -46.2° -59.2° 130.8° -96.8° E5
E6 93.8° 81.0° -89.6° -63.2° 138.9° E6
E7 -75.2° -63.2° 120.0° 60.9° -48.0° 123.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ngwb1 : (VAL2) (ASN61) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1ghfh1 : (VAL1) (GLY60) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d3mlrl1 : (TYR2) (SER56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ocsl1 : (VAL3) (SER56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2w9lb_ : (LEU20) (ASP82) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Coxsackie virus and adenovirus receptor (Car), domain 1 |Human (Homo sapiens) [TaxId: 9606]
d1n7ml1 : (VAL2) (GLU62) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d4od1l1 : (VAL3) (SER56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ypzf1 : (LYS3) (LEU61) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), gamma-chain [TaxId: 9606]
d1cl7h1 : (ILE2) (ALA60) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d4ocrl1 : (SER2) (SER56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4orgl1 : (VAL3) (SER56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j12b_ : (SER19) (ASP82) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qnzh_ : (GLN113) (ASN173) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1