Tableau information
Concept source: d1c48a_ amino acid (a.a.) range (TYR111)(ARG169)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR111) (ASN115) E1
(ASP118) (VAL124) E2
(GLU128) (ASN132) E3
(ARG133) (ILE145) H4
(THR149) (ASN155) E5
(GLY160) (SER164) E6
(SER164) (ARG169) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 158.2° E2
E3 -43.5° 148.8° E3
H4 -154.4° 39.0° -140.2° H4
E5 46.1° -113.3° 72.2° -147.3° E5
E6 -90.2° 102.2° -47.5° 103.2° 99.8° E6
E7 -158.1° 43.6° -118.1° 28.3° 151.5° -75.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d1ka_ : (TYR111) (ARG169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
d1bosa_ : (TYR1111) (ARG1169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
d4h02a1 : (MET140) (LEU213) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1krsa_ : (ARG73) (THR147) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Lysyl-tRNA synthetase (LysRS) |Escherichia coli, gene lysS [TaxId: 562]
d1efwa1 : (ASN26) (ALA101) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Aspartyl-tRNA synthetase (AspRS) |Thermus thermophilus, AspRS-1 [TaxId: 274]
d1wfqa_ : (GLU24) (SER84) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Cold shock domain protein E1 (UNR) |Human (Homo sapiens) [TaxId: 9606]
d1v1oa1 : (LYS45) (LYS106) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Exotoxin 1 (SET1, Superantigen-like protein 7) |Staphylococcus aureus [TaxId: 1280]
d4p2cb_ : (PHE10) (ASN68) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |automated matches |Escherichia coli [TaxId: 562]
d3a74a1 : (MET66) (PHE135) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Lysyl-tRNA synthetase (LysRS) |Geobacillus stearothermophilus [TaxId: 1422]
d1qoha_ : (GLU110) (ASN169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
d1c4qa_ : (TYR111) (ARG169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
d4pg3a1 : (MET140) (LEU213) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1czwa_ : (TYR111) (ARG169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
d1c48a_ : (TYR111) (ARG169) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Verotoxin-1/shiga-toxin, B-pentamer |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.40