Protein Concepts Dictionary

Tableau information

Concept source:  d3lf6a_  amino acid (a.a.) range (ASN84)(ILE159)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN84)   (ILE90) E1
	   (GLU93)   (GLU98) E2
	  (ASP105)  (ARG110) E3
	  (ARG110)  (ALA116) E4
	  (ASN119)  (ASP136) H5
	  (ASP136)  (VAL145) H6
	  (ASN147)  (ILE159) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -127.2°   E2                                        
E3      -88.1°  144.7°   E3                                 
E4      165.3°   57.2°  -88.8°   E4                          
H5      -29.0° -131.1°   78.9°  162.0°   H5                   
H6      -67.2°  129.7°   59.0°   99.0°  -86.0°   H6            
H7      140.2°  -42.4°  111.4°  -53.8°  118.7° -152.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4odxx_ :    (ALA85)  (SER160)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
 d4odxy_ :    (ALA85)  (SER160)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
 d3lf6a_ :    (ASN84)  (ILE159)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
 d1xiza_ :    (ASN76)  (SER152)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Putative PTS protein STM3784 |Salmonella typhimurium [TaxId: 90371]
 d2oqtc_ :    (ALA79)  (TYR153)   [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
 d1xizb_ :    (ASN76)  (SER152)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Putative PTS protein STM3784 |Salmonella typhimurium [TaxId: 90371]
 d3lf6b_ :    (ASN84)  (SER160)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
 d2oqtb_ :    (ALA79)  (SER148)   [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.112