Protein Concepts Dictionary

Tableau information

Concept source:  d1ktdb2  amino acid (a.a.) range (PRO32)(PRO119)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO32)   (ASN46) E1
	   (ARG50)   (TYR59) E2
	   (ASN64)   (ASP68) E3
	   (GLU73)   (THR78) E4
	   (THR78)   (GLN91) H5
	   (GLN91)  (PHE113) H6
	  (PHE113)  (PRO119) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      174.1°   E2                                        
E3      -15.1°  170.6°   E3                                 
E4      138.9°  -35.5°  153.8°   E4                          
H5      -57.4°  128.1°  -42.7° -163.2°   H5                   
H6      -62.4°  116.7°  -67.5°   96.5°   96.7°   H6            
H7      -87.0°   88.0° -101.0°   53.4° -143.4°  -55.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3p73a1 :    (GLY88)  (LYS177)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d1zagc2 :   (GLY102)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
 d4n0fa1 :    (LEU94)  (TRP176)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kt2b2 :    (PRO32)  (PRO119)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
 d1a6ab2 :     (PRO5)   (GLN92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR3 [TaxId: 9606]
 d1gzqa2 :   (GLY101)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1b [TaxId: 9606]
 d1ktdb2 :    (PRO32)  (PRO119)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
 d2pxyd2 :     (VAL8)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
 d1fneb2 :     (ARG4)   (PRO92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
 d1zaga2 :   (GLY102)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
 d1kjva2 :    (GLY91)  (ARG181)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus), RT1-AA [TaxId: 10116]
 d1i3rb2 :    (ARG30)  (PRO118)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
 d3dbxa1 :    (VAL98)  (ARG187)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d4wo4a1 :   (ALA100)  (LYS183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1a [TaxId: 9606]
 d3t8xc1 :    (PHE94)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1b [TaxId: 9606]
 d1a9ba2 :   (GLY100)  (ARG181)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Human (Homo sapiens), HLA-B35 [TaxId: 9606]
 d1zvsa2 :    (GLY91)  (GLY175)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Rhesus monkey (Macaca mulatta) [TaxId: 9544]
 d1zt4a2 :   (ALA100)  (LYS183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1d [TaxId: 9606]
 d1ddha2 :    (GLY91)  (ASN176)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Mouse (Mus musculus), H-2DD [TaxId: 10090]
 d1qqda2 :   (CYS101)  (ARG181)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Human (Homo sapiens), HLA-CW4 [TaxId: 9606]
 d1r5vb2 :    (ALA31)  (PRO119)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
 d3ruga1 :   (ALA102)  (LYS185)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1es0b2 :     (ARG5)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
 d1u3hd2 :     (ARG5)   (ARG92)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AU [TaxId: 10090]
 d3qiub1 :     (ARG4)   (PRO92)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1i1aa2 :    (PHE90)  (TRP178)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Fc (IgG) receptor, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1onqa2 :    (PRO93)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1a [TaxId: 9606]
 d2yeza1 :    (THR92)  (GLY177)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d1frta2 :    (PHE90)  (TRP178)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Fc (IgG) receptor, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2iadb2 :    (GLY13)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AD [TaxId: 10090]
 d3hujc1 :   (ALA100)  (LYS183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1a [TaxId: 9606]
 d1xz0c2 :   (GLY101)  (ARG183)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1b [TaxId: 9606]
 d1im9a2 :    (HIS93)  (ARG181)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Human (Homo sapiens), HLA-CW4 [TaxId: 9606]
 d3m1ba1 :    (TYR88)  (TRP176)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1f3jb2 :     (VAL8)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-A(G7) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.19