Protein Concepts Dictionary

Tableau information

Concept source:  d3hm8a1  amino acid (a.a.) range (LEU539)(SER609)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU539)  (GLY544) E1
	  (PHE548)  (THR556) E2
	  (GLY558)  (SER563) E3
	  (GLU564)  (PRO569) E4
	  (PRO569)  (GLN574) H5
	  (SER576)  (GLN595) H6
	  (GLY599)  (SER609) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      140.3°   E2                                        
E3      -58.3°  161.1°   E3                                 
E4      -33.6° -157.2°   37.9°   E4                          
H5      -91.9°  -80.8°  104.9°  -78.0°   H5                   
H6      140.2°  -44.5°  121.8°  158.4° -122.1°   H6            
E7      -24.2°  116.2°  -82.5°  -54.1°  -85.6°  129.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bg3a3 :   (PHE528)  (SER603)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1czan3 :   (PHE528)  (SER603)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d3qica1 :    (LEU75)  (SER151)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1bg3b3 :   (PHE528)  (SER603)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3hm8c1 :   (LEU539)  (SER609)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1dgkn3 :   (PHE528)  (SER603)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d3hm8a1 :   (LEU539)  (SER609)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55