Protein Concepts Dictionary

Tableau information

Concept source:  d2bmia_  amino acid (a.a.) range (ASP125)(SER230)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP125)  (SER130) E1
	  (MET134)  (TYR140) E2
	  (ASP148)  (LEU154) E3
	  (ASN158)  (GLY163) E4
	  (ASP181)  (LYS195) H5
	  (ARG200)  (GLY205) E6
	  (GLY211)  (SER230) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      166.8°   E2                                        
E3      -37.0°  153.5°   E3                                 
E4      121.3°  -46.2°  155.8°   E4                          
H5      -49.0°  143.6°  -16.3°  170.2°   H5                   
E6      110.6°  -57.4°  147.0°  -12.3°  158.4°   E6            
H7      150.5°  -16.3° -162.5°   30.8° -158.9°   42.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1x8ha_ :   (GLY178)  (ALA304)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d2bmib_ :   (ASP125)  (SER230)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d3knsb_ :   (VAL130)  (LYS227)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d1m2xc_ :   (LYS178)  (GLN295)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]
 d4nq7a_ :   (VAL130)  (LEU226)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d1x8ia_ :   (GLY178)  (ALA304)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d3knrc_ :   (VAL130)  (LYS227)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d2bmia_ :   (ASP125)  (SER230)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d3l6na_ :   (LYS141)  (LYS238)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Chryseobacterium indologenes [TaxId: 253]
 d4c09a_ :   (VAL160)  (LYS257)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Bacillus cereus [TaxId: 1396]
 d4c1ha_ :   (VAL160)  (LEU256)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d1m2xa_ :   (LYS178)  (GLN297)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]
 d2ynwb_ :   (ASP175)  (ASN295)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1a7ta_ :   (ASP125)  (SER230)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d1bvta_ :   (VAL130)  (LEU226)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d3knra_ :   (VAL130)  (LYS227)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157