Protein Concepts Dictionary

Tableau information

Concept source:  d1m2xa_  amino acid (a.a.) range (ASP41)(GLY123)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP41)   (LYS47) E1
	   (TYR53)   (ASN62) E2
	   (THR64)   (THR76) E3
	   (GLY79)   (ASP84) E4
	   (GLY88)  (LYS103) H5
	  (ILE110)  (HIS116) E6
	  (HIS118)  (GLY123) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      151.5°   E2                                        
E3      -44.1°  158.7°   E3                                 
E4      122.5°  -29.1°  154.4°   E4                          
H5      -40.6°  157.5°  -39.1°  151.6°   H5                   
E6      105.4°  -46.4°  139.3°  -17.5°  139.5°   E6            
H7      -74.3°  133.3°  -32.0° -157.8°  -50.6° -161.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m2xc_ :    (ASP41)  (GLY123)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]
 d2p97b_ :     (GLY0)   (THR77)   [view usage] : d.157.1.12 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Ava3068-like |Hypothetical protein Ava3068 |Anabaena variabilis [TaxId: 1172]
 d2yz3a_ :    (GLY22)  (VAL100)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas putida [TaxId: 303]
 d2m5ca_ :    (ILE16)   (GLY93)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d3knrc_ :    (ILE16)   (GLY93)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]
 d1ddka_ :     (LEU7)   (GLU87)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, IMP-1 [TaxId: 287]
 d3l6na_ :    (ASP24)  (GLY103)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Chryseobacterium indologenes [TaxId: 253]
 d1m2xa_ :    (ASP41)  (GLY123)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]
 d1wupb_ :     (LEU7)   (SER93)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]
 d3vpea_ :    (GLN10)   (GLY79)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Serratia marcescens [TaxId: 615]
 d3knra_ :    (ILE16)   (GLY93)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacillus cereus [TaxId: 1396]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157