Protein Concepts Dictionary

Tableau information

Concept source:  d2ff7a_  amino acid (a.a.) range (ASP467)(ASP529)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP467)  (ASN472) E1
	  (ASN472)  (LYS478) E2
	  (ASN487)  (LYS493) E3
	  (VAL497)  (ARG503) E4
	  (GLY507)  (ARG517) H5
	  (TYR519)  (ASN523) E6
	  (ASN523)  (ASP529) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2       77.2°   E2                                        
E3     -166.0°  116.8°   E3                                 
E4       35.4°  -53.0°  153.0°   E4                          
H5      113.6°   99.9°  -66.4°  135.8°   H5                   
E6       54.8°  131.5° -111.4°   85.3°  -94.0°   E6            
E7      173.4° -109.4°    7.4° -148.5°  -66.8° -118.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pzfb_ :   (GLU391)  (GLY486)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain |Human (Homo sapiens) [TaxId: 9606]
 d1mt0a_ :   (ASP467)  (ASP529)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
 d2d2fa_ :     (LEU4)   (LEU63)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2zu0c_ :     (MET1)   (LYS63)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2d3wa_ :     (MET1)   (LYS63)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d2ixga_ :   (GLY478)  (ASP542)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1b0ua_ :     (LYS6)   (ASN66)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |ATP-binding subunit of the histidine permease |Salmonella typhimurium [TaxId: 90371]
 d2olja_ :     (MET1)   (ILE60)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d2ff7a_ :   (ASP467)  (ASP529)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
 d1ji0a_ :     (VAL5)   (ASN65)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Branched chain aminoacid ABC transporter |Thermotoga maritima, TM1139 [TaxId: 2336]
 d3gfoa_ :     (ILE5)   (ASP66)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Clostridium perfringens [TaxId: 195103]
 d2pzeb_ :   (GLU391)  (GLY486)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain |Human (Homo sapiens) [TaxId: 9606]
 d3vx4d_ :   (ILE528)  (ASN588)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37